public class NucleotideImpl extends HetatomImpl implements Group, java.io.Serializable
HetatomImpl
,
AminoAcidImpl
,
Serialized FormModifier and Type | Field and Description |
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static java.lang.String |
type
this is a "nucleotide", a special occurance of a Hetatom.
|
atoms, pdb_flag, pdb_name, residueNumber
Constructor and Description |
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NucleotideImpl() |
Modifier and Type | Method and Description |
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java.lang.Object |
clone()
returns and identical copy of this Group object .
|
Atom |
getO3Prime()
Returns the O3' atom if present, otherwise null
|
Atom |
getO5Prime()
Returns the O5' atom if present, otherwise null
|
Atom |
getP()
Returns the P atom if present, otherwise null
|
java.lang.String |
getType()
Returns the type value.
|
java.lang.String |
toString() |
addAltLoc, addAtom, clearAtoms, getAltLocGroup, getAltLocs, getAtom, getAtom, getAtomByPDBname, getAtoms, getChain, getChainId, getChemComp, getId, getParent, getPDBCode, getPDBName, getProperties, getProperty, getResidueNumber, has3D, hasAltLoc, hasAminoAtoms, hasAtom, isWater, iterator, setAtoms, setChain, setChemComp, setId, setParent, setPDBCode, setPDBFlag, setPDBName, setProperties, setProperty, setResidueNumber, setResidueNumber, size, trimToSize
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
addAltLoc, addAtom, clearAtoms, getAltLocGroup, getAltLocs, getAtom, getAtom, getAtomByPDBname, getAtoms, getChain, getChainId, getChemComp, getParent, getPDBCode, getPDBName, getProperties, getProperty, getResidueNumber, has3D, hasAltLoc, hasAminoAtoms, hasAtom, isWater, iterator, setAtoms, setChain, setChemComp, setParent, setPDBCode, setPDBFlag, setPDBName, setProperties, setProperty, setResidueNumber, setResidueNumber, size, trimToSize
public static final java.lang.String type
public java.lang.String getType()
HetatomImpl
getType
in interface Group
getType
in class HetatomImpl
public java.lang.String toString()
toString
in class HetatomImpl
public Atom getO3Prime()
public Atom getO5Prime()
public Atom getP()
public java.lang.Object clone()
HetatomImpl
clone
in interface Group
clone
in class HetatomImpl